Repozytorium

Autor publikacji Małgorzata Biczysko

2026

Cluster–support and anharmonic effects in the infrared spectra of Cu5–coronene

Krupka Katarzyna M., Biczysko Małgorzata, de Lara-Castells María Pilar

2025

AQuaRef: machine learning accelerated quantum refinement of protein structures

Zubatyuk Roman, Biczysko Małgorzata, Ranasinghe Kavindri, Moriarty Nigel W., Gokcan Hatice, Kruse Holger, Poon Billy K., Adams Paul D., Waller Mark P., Roitberg Adrian E., Isayev Olexandr, Afonine Pavel V.

2024
2024

Editorial: Hot topic: excited state processes in biomolecules

Fang Chong, Rega Nadia, Biczysko Małgorzata

2024

Investigating the stability of aromatic carboxylic acids in hydrated magnesium sulfate under UV irradiation to assist detection of organics on Mars

Alberini Andrew, Fornaro Teresa, Garcia-Florentino Cristina, Biczysko Małgorzata, Poblacion Iratxe, Aramendia Julene, Madariaga Juan Manuel, Poggiali Giovanni, Vicente-Retortillo Álvaro, Benison Kathleen C., Siljeström Sandra, Biancalani Sole, Lorenz Christian, Cloutis Edward A., Applin Dan M., Gómez Felipe, Steele Andrew, Wiens Roger C., Hand Kevin P., Brucato John R.

2024

Undecanoic Acid and L-Phenylalanine in Vermiculite: Detection, Characterization, and UV Degradation Studies for Biosignature Identification on Mars

McIntosh Ophélie, Garcia-Florentino Cristina, Fornaro Teresa, Marabello Domenica, Alberini Andrew, Siljeström Sandra, Biczysko Małgorzata, Szopa Cyril, Brucato John R.

2023

Isomerization-induced fluorescence enhancement of two new viologen derivatives: mechanism insight and DFT calculations

Yin Xiuping, Li Xinxing, Li Xuyi, Biczysko Małgorzata, Zhu Shourong, Xu Jiaqiang, Bai Yue-Ling

2023

Optimal clustering for quantum refinement of biomolecular structures: Q|R#4

Wang Yaru, Kruse Holger, Moriarty Nigel W., Waller Mark P., Afonine Pavel V., Biczysko Małgorzata

2022

A radical approach to radicals

Liu Youjia, Biczysko Małgorzata, Moriarty Nigel W.

2022

A Tribute to Vincenzo Barone

Puzzarini Cristina, Biczysko Małgorzata, Gagliardi Laura

2022

Editorial: Theoretical Characterization of Astrophysical Species

Biczysko Małgorzata, Linguerri Roberto, Hochlaf Majdi

2022

The chirality of isotopomers of glycine compared using next‐generation QTAIM

Nie Xing, Yang Yong, Xu Tianlv, Biczysko Małgorzata, Kirk Steven R., Jenkins Samantha

2021

Computational molecular spectroscopy

Barone Vincenzo, Alessandrini Silvia, Biczysko Małgorzata, Cheeseman James R., Clary David C., McCoy Anne B., DiRisio Ryan J., Neese Frank, Melosso Mattia, Puzzarini Cristina

2021

Professor Zofia Mielke – A Real Women of Science

Fausto Rui, Haupa Karolina Anna, Biczysko Małgorzata, Tarczay György

2020

Including crystallographic symmetry in quantum-based refinement: Q|R#2

Zheng Min, Biczysko Małgorzata, Xu Yanting, Moriarty Nigel W., Kruse Holger, Urzhumtsev Alexandre, Waller Mark P., Afonine Pavel V.

2020

Real-space quantum-based refinement for cryo-EM: Q|R#3

Wang Lum, Kruse Holger, Sobolev Oleg V., Moriarty Nigel W., Waller Mark P., Afonine Pavel V., Biczysko Małgorzata

2020

The challenging equilibrium structure of HSSH: Another success of the rotational spectroscopy / quantum chemistry synergism

Ye Hexu, Mendolicchio Marco, Kruse Holger, Puzzarini Cristina, Biczysko Małgorzata, Barone Vincenzo

2020

UV Irradiation and Near Infrared Characterization of Laboratory Mars Soil Analog Samples

Fornaro Teresa, Brucato John R., Poggiali Giovanni, Corazzi Maria Angela, Biczysko Małgorzata, Jaber Maguy, Foustoukos Dionysis, Hazen Robert M., Steele Andrew

2019

Absorption-emission symmetry breaking and the different origins of vibrational structures of the 1Qy and 1Qx electronic transitions of pheophytin a

Rätsep Margus, Linnanto Juha Matti, Muru Renata, Biczysko Małgorzata, Reimers Jeffrey R., Freiberg Arvi

2019
2019

Pressure-induced reversible framework rearrangement and increased polarization in the polar [NH4][Cd(HCOO)3] hybrid perovskite

Bermúdez-Garcia Juan Manuel, Garcia-Fernández Alberto, Andrada-Chacón Adrián, Sánchez-Benítez Javier, Ren Wei, Hu Shunbo, Gu Teng, Xiang Hongjun, Biczysko Małgorzata, Castro-Garcia Socorro, Sánchez-Andújar Manuel, Stroppa Alessandro, Señaris-Rodrigues Maria Antonia

2018

Accurate rest frequencies for propargylamine in the ground and low-lying vibrational states

Degli Esposti Claudio, Dore Luca, Puzzarini Cristina, Biczysko Małgorzata, Bloino Julien, Bizzocchi L., Lattanzi V., Grabow J.-U.

2018

Computational challenges in Astrochemistry

Biczysko Małgorzata, Bloino Julien, Puzzarini Cristina

2018

Molecules in confinement in clusters, quantum solvents and matrices: general discussion

Bacic Zlatko, Benoit David, Biczysko Małgorzata, Bowman Joel, Bradforth Stephen, Burd Timothy, Chambaud Gilberte, Clary David C., Crépin Claudine, Dracinsky Martin, Felker Peter, Fischer Ingo, Gianturco Francesco, Hochlaf Majdi, Kouril Karel, Kratochvilova Irena, Liu ChunMei, McCoy Anne B., Miyazaki Jun, Mouhib Halima, Richardson Jeremy, Slaviček Petr, Stoecklin Thierry, Szalewicz Krzysztof, van der Avoird Ad, Zehnacker-Rentien Anne

2018
2017

A combined theoretical and experimental study of the ionic states of iodopentafluorobenzene

Palmer Michael H., Coreno Marcello, de Simone Monica, Hoffmann Søren Vrønning, Jones Nykola C., Grazioli Cesare, Peterson Kirk A., Baiardi Alberto, Zhang Teng, Biczysko Małgorzata

2017

A combined theoretical and experimental study of the valence and Rydberg states of iodopentafluorobenzene

Palmer Michael H., Hoffmann Søren Vrønning, Jones Nykola C., Coreno Marcello, de Simone Monica, Grazioli Cesare, Peterson Kirk A., Baiardi Alberto, Zhang Teng, Biczysko Małgorzata

2017

Accurate spectroscopic characterization of the HOC(O)O radical: A route toward its experimental identification

Puzzarini Cristina, Biczysko Małgorzata, Peterson Kirk A., Francisco Joseph S., Linguerri Roberto

2017

Accurate Vibrational–Rotational Parameters and Infrared Intensities of 1-Bromo-1-fluoroethene: A Joint Experimental Analysis and Ab Initio Study

Pietropolli Charmet Andrea, Stoppa Paolo, Giorgianni Santi, Bloino Julien, Tasinato Nicola, Carnimeo Ivan, Biczysko Małgorzata, Puzzarini Cristina

2017

Structural and Vibrational Properties of Iodopentafluorobenzene: A Combined Raman and Infrared Spectral and Theoretical Study

Palmer Michael H., Biczysko Małgorzata, Peterson Kirk A., Stapleton Christopher S., Wells Simon P.

2017

The ionic states of difluoromethane: A reappraisal of the low energy photoelectron spectrum including ab initio configuration interaction computations

Palmer Michael H., Biczysko Małgorzata, Baiardi Alberto, Coreno Marcello, de Simone Monica, Grazioli Cesare, Hoffmann Søren Vrønning, Jones Nykola C., Peterson Kirk A.

2016

Challenges facing an understanding of the nature of low-energy excited states in photosynthesis

Reimers Jeffrey R., Biczysko Małgorzata, Bruce Douglas, Coker David F., Frankcombe Terry J., Hashimoto Hideki, Hauer Jürgen, Jankowiak Ryszard, Kramer Tobias, Linnanto Juha Matti, Mamedov Fikret, Müh Frank, Rätsep Margus, Renger Thomas, Styring Stenbjörn, Wan Jian, Wang Zhuan, Wang-Otomo Zheng-Yu, Weng Yu-Xiang, Yang Chunhong, Zhang Jian-Ping, Freiberg Arvi, Krausz Elmars

2016

Combined theoretical and experimental study of the valence, Rydberg, and ionic states of chlorobenzene

Palmer Michael H., Ridley Trevor, Hoffmann Søren Vrønning, Jones Nykola C., Coreno Marcello, de Simone Monica, Grazioli Cesare, Zhang Teng, Biczysko Małgorzata, Baiardi Alberto, Peterson Kirk A.

2016

Combined theoretical and experimental study of the valence, Rydberg and ionic states of fluorobenzene

Palmer Michael H., Ridley Trevor, Hoffmann Søren Vrønning, Jones Nykola C., Coreno Marcello, de Simone Monica, Grazioli Cesare, Zhang Teng, Biczysko Małgorzata, Baiardi Alberto, Peterson Kirk A.

2016
2015

CC/DFT Route toward Accurate Structures and Spectroscopic Features for Observed and Elusive Conformers of Flexible Molecules: Pyruvic Acid as a Case Study

Barone Vincenzo, Biczysko Małgorzata, Bloino Julien, Cimino Paola, Penocchio Emanuele, Puzzarini Cristina

2015
2015

Computational Tools for Structure, Spectroscopy and Thermochemistry

Barone Vincenzo, Biczysko Małgorzata, Carnimeo Ivan

2015

Implementation of a graphical user interface for the virtual multifrequency spectrometer: The VMS‐Draw tool

Licari Daniele, Baiardi Alberto, Biczysko Małgorzata, Egidi Franco, Latouche Camille, Barone Vincenzo

2015

Interpretation of the photoelectron, ultraviolet, and vacuum ultraviolet photoabsorption spectra of bromobenzene by ab initio configuration interaction and DFT computations

Palmer Michael H., Ridley Trevor, Hoffmann Søren Vrønning, Jones Nykola C., Coreno Marcello, de Simone Monica, Grazioli Cesare, Zhang Teng, Biczysko Małgorzata, Baiardi Alberto, Peterson Kirk

2015

Interpretation of the vacuum ultraviolet photoabsorption spectrum of iodobenzene by ab initio computations

Palmer Michael H., Ridley Trevor, Hoffmann Søren Vrønning, Jones Nykola C., Coreno Marcello, de Simone Monica, Grazioli Cesare, Biczysko Małgorzata, Baiardi Alberto, Limão-Vieira Paulo

2015

The ionic states of iodobenzene studied by photoionization and ab initio configuration interaction and DFT computations

Palmer Michael H., Ridley Trevor, Hoffmann Søren Vrønning, Jones Nykola C., Coreno Marcello, de Simone Monica, Grazioli Cesare, Biczysko Małgorzata, Baiardi Alberto

2015

Toward the design of alkynylimidazole fluorophores: computational and experimental characterization of spectroscopic features in solution and in poly(methyl methacrylate)

Barone Vincenzo, Bellina Fabio, Biczysko Małgorzata, Bloino Julien, Fornaro Teresa, Latouche Camille, Lessi Marco, Marianetti Giulia, Minei Pierpaolo, Panattoni Alessandro, Pucci Andrea

2015
2014

Accurate Characterization of the Peptide Linkage in the Gas Phase: A Joint Quantum-Chemical and Rotational Spectroscopy Study of the Glycine Dipeptide Analogue

Puzzarini Cristina, Biczysko Małgorzata, Barone Vincenzo, Largo Laura, Peña Isabel, Cabezas Carlos, Alonso José Luis

2014
2014

Computational Investigation on the Spectroscopic Properties of Thiophene Based Europium β-Diketonate Complexes

Greco Claudio, Moro Giorgio, Bertini Luca, Biczysko Małgorzata, Barone Vincenzo, Cosentino Ugo

2014

Molecular Structure and Spectroscopic Signatures of Acrolein: Theory Meets Experiment

Puzzarini Cristina, Penocchio Emanuele, Biczysko Małgorzata, Barone Vincenzo

2014

Ultrafast resonance energy transfer in the umbelliferone–alizarin bichromophore

Lapini Andrea, Fabbrizzi Pierangelo, Piccardo Matteo, di Donato Mariangela, Lascialfari Luisa, Foggi Paolo, Cicchi Stefano, Biczysko Małgorzata, Carnimeo Ivan, Santoro Fabrizio, Cappelli Chiara, Righini Roberto

2013

Accurate molecular structure and spectroscopic properties of nucleobases: a combined computational–microwave investigation of 2-thiouracil as a case study

Puzzarini Cristina, Biczysko Małgorzata, Barone Vincenzo, Peña Isabel, Cabezas Carlos, Alonso José Luis

2013

An integrated experimental and quantum-chemical investigation on the vibrational spectra of chlorofluoromethane

Pietropolli Charmet Andrea, Stoppa Paolo, Tasinato Nicola, Giorgianni Santi, Barone Vincenzo, Biczysko Małgorzata, Bloino Julien, Cappelli Chiara, Carnimeo Ivan, Puzzarini Cristina

2013

Anharmonic theoretical simulations of infrared spectra of halogenated organic compounds

Carnimeo Ivan, Puzzarini Cristina, Tasinato Nicola, Stoppa Paolo, Pietropolli Charmet Andrea, Biczysko Małgorzata, Cappelli Chiara, Barone Vincenzo

2013

Computational Design, Synthesis, and Mechanochromic Properties of New Thiophene‐Based π‐Conjugated Chromophores

Prampolini Giacomo, Bellina Fabio, Biczysko Małgorzata, Cappelli Chiara, Carta Luciano, Lessi Marco, Pucci Andrea, Ruggeri Giacomo, Barone Vincenzo

2013

Glycine conformers: a never-ending story?

Barone Vincenzo, Biczysko Małgorzata, Bloino Julien, Puzzarini Cristina

2013

Including nuclear quantum effects into highly correlated electronic structure calculations of weakly bound systems

Aguirre Néstor F., Villarreal Pablo, Delgado-Barrio Gerardo, Posada Edwin, Reyes Andrés, Biczysko Małgorzata, Mitrushchenkov Alexander O., de Lara-Castells María Pilar

2012

Fully ab initio IR spectra for complex molecular systems from perturbative vibrational approaches: Glycine as a test case

Biczysko Małgorzata, Bloino Julien, Carnimeo Ivan, Panek Paweł, Barone Vincenzo

2012

Implementation and validation of a multi-purpose virtual spectrometer for large systems in complex environments

Barone Vincenzo, Baiardi Alberto, Biczysko Małgorzata, Bloino Julien, Cappelli Chiara, Lipparini Filippo

2012

Integrated computational approaches for spectroscopic studies of molecular systems in the gas phase and in solution: pyrimidine as a test case

Biczysko Małgorzata, Bloino Julien, Brancato Giuseppe, Cacelli Ivo, Cappelli Chiara, Ferretti Alessandro, Lami Alessandro, Monti Susanna, Pedone Alfonso, Prampolini Giacomo, Puzzarini Cristina, Santoro Fabrizio, Trani Fabio, Villani Giovanni

2012

Solvent effects on electron-driven proton-transfer processes: adenine–thymine base pairs

Dargiewicz Monika, Biczysko Małgorzata, Improta Roberto, Barone Vincenzo

2011

Noncovalent Interactions in the Gas Phase: The Anisole–Phenol Complex

Pietraperzia Giangaetano, Pasquini Massimiliano, Mazzoni Federico, Piani Giovanni, Becucci Maurizio, Biczysko Małgorzata, Michalski Daniel, Bloino Julien, Barone Vincenzo

2011

Time‐Independent Approach to Vibrational Spectroscopies

Cappelli Chiara, Biczysko Małgorzata

2011

Time‐Independent Approaches to Simulate Electronic Spectra Lineshapes: From Small Molecules to Macrosystems

Biczysko Małgorzata, Bloino Julien, Santoro Fabrizio, Barone Vincenzo

2010

Environmental Effects in Computational Spectroscopy: Accuracy and Interpretation

Pedone Alfonso, Biczysko Małgorzata, Barone Vincenzo

2010

General Approach to Compute Vibrationally Resolved One-Photon Electronic Spectra

Bloino Julien, Biczysko Małgorzata, Santoro Fabrizio, Barone Vincenzo

2010

Integrated experimental and computational spectroscopy study on π-stacking interaction: the anisole dimer

Schiccheri Nicola, Pasquini Massimiliano, Piani Giovanni, Pietraperzia Giangaetano, Becucci Maurizio, Biczysko Małgorzata, Bloino Julien, Barone Vincenzo

2009
2009

The Gas Phase Anisole Dimer: A Combined High-Resolution Spectroscopy and Computational Study of a Stacked Molecular System

Pietraperzia Giangaetano, Pasquini Massimiliano, Schiccheri Nicola, Piani Giovanni, Becucci Maurizio, Castellucci E., Biczysko Małgorzata, Bloino Julien, Barone Vincenzo

2008

Integrated computational approach to vibrationally resolved electronic spectra: Anisole as a test case

Bloino Julien, Biczysko Małgorzata, Crescenzi Orlando, Barone Vincenzo

2007

Isotopomeric Conformational Changes in the Anisole−Water Complex:  New Insights from HR-UV Spectroscopy and Theoretical Studies

Pasquini Massimiliano, Schiccheri Nicola, Piani Giovanni, Pietraperzia Giangaetano, Becucci Maurizio, Biczysko Małgorzata, Pavone Michele, Barone Vincenzo

2007

On the properties of microsolvated molecules in the ground (S0) and excited (S1) states: The anisole-ammonia 1:1 complex

Biczysko Małgorzata, Piani Giovanni, Pasquini Massimiliano, Schiccheri Nicola, Pietraperzia Giangaetano, Becucci Maurizio, Pavone Michele, Barone Vincenzo

2006

Accurate MRCI study of ground-state N2H2 potential energy surface

Biczysko Małgorzata, Poveda L. A., Varandas A. J. C.

2006

Predicting Catalysis:  Understanding Ammonia Synthesis from First-Principles Calculations

Hellman A., Baerends E. J., Biczysko Małgorzata, Bligaard T., Christensen C. H., Clary David C., Dahl S., van Harrevelt R., Honkala K., Jonsson H., Kroes G. J., Luppi M., Manthe U., Nørskov J. K., Olsen R. A., Rossmeisl J., Skúlason E., Tautermann C. S., Varandas A. J. C., Vincent J. K.

2005

Computational Study of the Adsorption Energetics and Vibrational Wavenumbers of NH3 Adsorbed on the Ni(111) Surface

Kurten Theo, Biczysko Małgorzata, Rajamäki Timo, Laasonen Kari, Halonen Lauri

2003

Variational calculations of HBN energy levels in the X2Π and A 2 Σ+ states

Biczysko Małgorzata, Tarroni Riccardo, Carter Stuart

2002

Theoretical study of anharmonic resonances in HBS+

Biczysko Małgorzata, Tarroni Riccardo